Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003137.1 Hibiscus syriacus cultivar Beakdansim tig00006582_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  96347

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2737--2806
18
3.9
18
92
3
106
30
34
18
17
1.94
7594--7645
17
3.1
17
76
20
56
65
1
0
32
1.04
12171--12212
3
14.0
3
100
0
84
66
0
0
33
0.92
13569--13636
2
34.0
2
100
0
136
50
0
0
50
1.00
14172--14210
20
2.0
19
85
5
51
23
10
15
51
1.73
15996--16057
20
3.0
20
81
9
70
51
17
16
14
1.76
16963--17000
14
2.7
14
88
8
51
28
10
23
36
1.88
22202--22226
6
4.2
6
100
0
50
84
0
0
16
0.63
29331--29364
12
2.8
13
86
13
54
38
0
0
61
0.96
29471--29566
31
3.1
31
69
19
83
55
3
1
40
1.23
29487--29526
21
1.9
21
89
0
62
57
2
2
37
1.26
31452--31479
13
2.2
13
100
0
56
14
28
0
57
1.38
31690--31716
13
2.1
13
100
0
54
22
7
0
70
1.12
33769--33802
17
2.0
17
100
0
68
35
11
11
41
1.78
45447--45499
25
2.1
25
82
6
63
39
0
0
60
0.97
48093--48146
28
1.9
28
96
0
99
31
7
9
51
1.61
49223--49346
45
2.7
45
84
7
153
19
13
24
42
1.87
49223--49340
46
2.6
46
85
6
143
19
14
24
41
1.89
49240--49357
46
2.6
45
78
9
132
23
14
20
41
1.89
52768--52795
2
14.0
2
100
0
56
50
0
0
50
1.00
59612--59656
23
2.0
23
100
0
90
26
8
6
57
1.54
61364--61412
22
2.2
22
78
7
55
65
10
6
18
1.43
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66980--67013
14
2.4
14
90
5
50
29
2
0
67
1.05
67434--67474
7
5.9
7
83
11
57
58
0
0
41
0.98
67882--67927
24
1.9
24
86
0
65
6
26
19
47
1.73
71328--71378
23
2.1
24
82
13
61
56
5
11
25
1.57
71976--72037
32
1.9
32
90
0
97
25
33
19
20
1.96
85220--85432
105
2.0
105
98
0
408
38
19
12
29
1.88
85702--85754
27
1.9
28
92
3
90
43
22
5
28
1.76
89264--89428
30
5.5
30
83
2
188
37
19
21
21
1.94
95324--95401
3
26.3
3
71
7
61
57
0
42
0
0.98
95332--95402
6
12.0
6
92
5
101
53
0
46
0
1.00
95332--95402
25
3.0
22
84
15
97
53
0
46
0
1.00

Tables:   1

The End!