Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000314.1 Hibiscus syriacus cultivar Beakdansim tig00000593_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  93022

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21146--21186
16
2.6
16
88
3
57
41
12
17
29
1.85
23312--23355
2
22.0
2
100
0
88
50
0
0
50
1.00
55517--55557
16
2.6
16
92
3
66
36
9
21
31
1.86
57178--57207
2
15.0
2
100
0
60
50
0
0
50
1.00
58463--58555
24
3.9
24
71
5
80
46
16
13
23
1.83
61011--61059
15
3.1
16
85
5
57
26
26
32
14
1.94
61020--61059
7
5.4
7
82
11
53
27
25
32
15
1.95
61057--61104
18
2.7
18
83
0
60
12
16
50
20
1.78
63125--63231
24
4.5
24
74
0
97
48
15
12
23
1.79
63125--63233
48
2.3
48
77
0
119
48
15
12
22
1.79
66505--66760
128
2.0
123
85
7
338
46
8
8
36
1.65
73159--73231
23
3.1
23
74
2
74
39
12
6
41
1.69
73163--73243
23
3.5
23
74
1
72
35
9
7
46
1.65
73895--73930
2
18.0
2
100
0
72
50
0
0
50
1.00
78730--78771
19
2.2
19
87
8
59
40
19
0
40
1.51
83624--83677
27
2.0
27
100
0
108
37
29
3
29
1.75
85222--85250
3
9.7
3
100
0
58
65
0
0
34
0.93
88531--88568
18
2.0
19
90
10
60
50
21
5
23
1.69

Tables:   1

The End!