Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003146.1 Hibiscus syriacus cultivar Beakdansim tig00006618_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66618

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13613--13641
2
14.5
2
100
0
58
48
0
0
51
1.00
16891--16920
6
5.0
6
100
0
60
50
0
50
0
1.00
19869--20254
183
2.1
182
92
3
634
45
8
2
42
1.49
23123--23223
39
2.6
39
93
0
166
50
12
12
23
1.75
25551--25622
36
2.0
37
88
2
110
36
6
8
48
1.60
34862--34898
19
2.0
18
89
5
56
27
0
27
45
1.54
37772--37803
13
2.4
14
94
5
57
21
3
37
37
1.70
39512--39543
2
16.5
2
93
6
57
50
0
0
50
1.00
50163--50250
42
2.1
42
91
4
124
23
12
15
47
1.80
50914--50970
28
2.0
28
89
0
87
45
10
19
24
1.81
54788--54888
32
3.2
32
75
10
109
25
14
22
36
1.93
55719--55790
31
2.4
29
84
9
92
27
15
12
44
1.82
60507--60586
36
2.3
35
87
8
117
33
3
16
46
1.65

Tables:   1

The End!