Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003148.1 Hibiscus syriacus cultivar Beakdansim tig00006623_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62737

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1798--1826
15
1.9
15
100
0
58
48
27
6
17
1.72
1939--2318
178
2.1
180
88
6
569
42
3
8
46
1.49
4115--4143
3
9.7
3
100
0
58
65
0
0
34
0.93
6607--6692
23
3.7
23
88
0
136
24
19
19
36
1.95
15132--15170
15
2.6
15
91
0
60
51
7
30
10
1.64
24617--24747
3
43.7
3
92
0
217
62
0
3
34
1.11
24997--25422
113
3.8
112
93
1
717
29
19
11
38
1.87
26160--26396
84
2.8
84
95
0
422
37
21
13
26
1.91
27518--27561
20
2.3
20
81
18
58
2
15
0
81
0.78
38168--38204
15
2.7
15
88
12
53
62
8
5
24
1.44
38935--38975
20
2.0
21
85
4
57
58
2
2
36
1.24
40360--40493
3
44.7
3
92
0
223
62
0
2
34
1.10
47259--47292
16
2.1
16
94
0
59
32
8
26
32
1.87
48042--48074
15
2.1
16
88
5
50
51
15
24
9
1.72
53151--53216
28
2.4
27
80
5
69
51
1
0
46
1.10
55269--55313
20
2.4
19
82
10
65
22
24
8
44
1.81
55276--55313
20
1.9
20
94
0
67
21
23
10
44
1.83

Tables:   1

The End!