Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003150.1 Hibiscus syriacus cultivar Beakdansim tig00006625_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45693

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1242--1290
2
25.5
2
79
8
57
44
0
2
53
1.12
1330--1408
35
2.4
33
81
12
83
39
10
6
44
1.64
1377--1433
23
2.5
22
77
8
60
38
12
1
47
1.51
2574--2605
16
2.1
16
94
5
57
28
0
0
71
0.86
2588--2634
13
3.8
13
83
16
64
31
0
0
68
0.90
2583--2634
23
2.2
24
89
3
79
32
0
0
67
0.91
2580--2638
24
2.5
24
86
8
86
30
0
0
69
0.89
3679--3787
36
3.1
34
87
6
146
47
7
12
32
1.69
3873--4132
44
5.9
44
80
3
211
33
12
19
33
1.90
3896--4158
131
2.0
132
83
3
332
34
12
20
32
1.90
6599--6656
23
2.5
23
94
5
100
24
22
15
37
1.93
8338--8484
12
12.2
12
88
0
123
10
27
14
46
1.78
8352--8470
4
29.8
4
91
0
130
6
28
17
47
1.73
8340--8482
8
17.9
8
89
0
124
9
27
14
47
1.76
16283--16308
11
2.4
11
100
0
52
50
0
0
50
1.00
16283--16393
11
10.6
11
71
19
51
50
1
0
46
1.18
31937--32004
31
2.2
31
86
7
93
35
11
19
33
1.88
34368--34507
71
2.0
71
94
0
244
25
19
20
35
1.95
45010--45109
22
4.6
22
93
3
159
34
15
13
38
1.85

Tables:   1

The End!