Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003151.1 Hibiscus syriacus cultivar Beakdansim tig00006626_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69252

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2887--2944
30
2.0
30
82
3
73
50
6
5
37
1.52
5234--5406
16
10.4
16
69
19
79
43
2
2
50
1.29
5291--5502
2
108.0
2
68
15
104
43
3
3
50
1.35
5273--5439
16
10.4
16
76
12
112
44
2
2
50
1.30
5443--5492
25
1.9
27
84
8
68
40
4
6
50
1.46
10434--10468
8
4.4
8
92
0
52
51
11
0
37
1.38
19453--19495
3
14.3
3
100
0
86
67
0
0
32
0.91
28074--28134
23
2.6
22
87
5
86
24
27
27
19
1.99
33193--33253
23
2.7
23
89
0
104
26
27
27
18
1.98
38301--38361
23
2.7
23
89
0
104
26
27
27
18
1.98
39517--39547
2
15.5
2
100
0
62
48
0
0
51
1.00
41612--41695
2
42.0
2
100
0
168
50
0
50
0
1.00
51529--51573
19
2.3
20
88
3
65
13
22
40
24
1.90
51529--51573
10
4.6
10
83
5
65
13
22
40
24
1.90
51967--52005
16
2.4
16
91
0
60
23
12
17
46
1.83
52079--52117
16
2.4
16
91
0
60
23
12
17
46
1.83
51907--52182
112
2.5
112
97
0
516
28
11
15
44
1.81
55750--56085
171
2.0
171
98
0
654
27
16
16
40
1.89
62626--62676
15
3.4
15
86
0
75
39
5
17
37
1.74
62620--62692
30
2.5
29
90
2
119
45
6
16
31
1.74
62682--62740
20
3.0
20
94
0
109
35
6
15
42
1.73
63067--63114
22
2.0
25
84
11
66
62
0
0
37
0.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63057--63143
32
2.8
31
80
18
92
55
2
0
42
1.12
63125--63194
27
2.9
22
74
24
61
47
1
1
50
1.19
63095--63210
50
2.2
52
82
10
141
51
1
0
45
1.17
64998--65022
7
3.6
7
100
0
50
56
0
44
0
0.99

Tables:   1

The End!