Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003152.1 Hibiscus syriacus cultivar Beakdansim tig00006627_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61540

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3467--3500
2
17.5
2
93
6
61
50
0
0
50
1.00
8126--8348
2
113.5
2
63
19
60
47
4
4
43
1.42
15062--15113
16
3.2
17
72
22
58
42
0
21
36
1.53
16301--16340
2
20.5
2
94
5
73
50
0
0
50
1.00
16403--16470
30
2.4
29
83
11
79
38
7
5
48
1.55
20686--20733
19
2.4
19
86
6
60
37
18
6
37
1.76
20703--20739
19
1.9
19
88
0
56
40
18
2
37
1.65
20703--20745
19
2.3
19
83
0
50
37
18
4
39
1.72
21562--21595
12
2.8
12
90
0
50
55
29
0
14
1.40
24308--24375
34
2.0
34
85
5
93
25
19
23
32
1.97
24514--24671
64
2.5
64
95
1
280
50
17
1
30
1.56
26022--26139
21
5.6
21
79
10
125
22
20
35
21
1.96
26022--26144
42
2.9
42
88
0
183
23
20
35
20
1.96
26284--26325
4
10.5
4
80
10
50
71
4
0
23
1.05
28726--28767
22
1.9
22
95
0
75
21
14
42
21
1.88
28927--28972
20
2.3
20
100
0
92
15
15
26
43
1.85
28943--29013
20
3.5
20
75
11
65
21
12
25
40
1.88
32533--32739
5
41.8
5
91
8
336
58
0
0
41
0.98
32814--32857
5
8.2
5
82
12
52
54
2
0
43
1.12
34198--34296
33
3.2
33
76
16
129
56
8
16
19
1.64
34218--34307
27
3.1
27
76
17
99
57
7
17
16
1.62
39206--39233
6
4.7
6
100
0
56
17
17
64
0
1.30
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43860--43886
2
13.5
2
100
0
54
48
0
0
51
1.00

Tables:   1

The End!