Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003166.1 Hibiscus syriacus cultivar Beakdansim tig00006661_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52124

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
79--129
22
2.3
22
93
3
84
25
23
19
31
1.98
4036--4172
64
2.2
64
80
6
145
33
19
22
24
1.97
4180--4217
20
1.9
20
94
0
67
31
18
23
26
1.97
10101--10152
17
2.9
17
77
8
59
55
0
7
36
1.29
10795--10864
23
3.0
23
82
0
95
21
22
25
30
1.99
16116--16240
60
2.1
60
82
5
155
43
12
8
35
1.74
29534--29568
18
1.9
18
88
11
54
31
34
17
17
1.93
36309--36345
18
2.1
18
94
0
65
27
32
18
21
1.97
36773--36810
18
2.1
18
85
9
51
47
10
5
36
1.61
44991--45048
24
2.5
22
73
18
55
37
22
1
37
1.65
45321--45358
18
2.1
18
85
9
51
47
10
5
36
1.61
45529--45572
19
2.4
19
85
11
56
25
22
18
34
1.96
45734--45777
20
2.1
22
84
16
58
36
22
0
40
1.54
45788--45823
13
2.8
13
95
0
63
52
22
0
25
1.47
50270--50336
34
1.9
34
82
14
84
47
19
11
20
1.81
50502--50556
23
2.4
23
84
0
83
29
25
10
34
1.90

Tables:   1

The End!