Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003167.1 Hibiscus syriacus cultivar Beakdansim tig00006662_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57600

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1973--2007
16
2.2
16
89
0
52
8
8
5
77
1.13
4026--4063
4
10.0
4
88
11
62
50
0
0
50
1.00
7191--7215
7
3.6
7
100
0
50
28
12
16
44
1.83
7373--7440
32
2.1
33
97
2
129
35
17
17
29
1.93
12650--12703
26
2.0
27
89
3
83
18
11
11
59
1.60
21725--21773
13
3.6
13
81
8
62
26
2
14
57
1.48
21755--21819
23
2.9
22
72
19
62
24
1
9
64
1.31
23724--23762
20
2.0
20
89
0
60
33
10
23
33
1.88
28648--28689
21
2.0
21
95
0
75
26
28
21
23
1.99
28863--28922
29
2.0
31
87
6
88
41
15
6
36
1.73
33382--33458
21
3.6
21
91
3
127
19
41
23
15
1.89
39179--39267
23
4.0
23
85
7
103
23
28
28
20
1.99
40842--40880
18
2.2
18
85
0
51
35
30
25
7
1.84
42088--42151
10
6.2
10
76
5
56
59
17
12
10
1.61
42080--42141
17
3.8
17
81
12
85
59
19
11
9
1.58
42078--42140
31
2.0
31
100
0
126
61
19
9
9
1.53
52479--52508
15
2.0
15
93
0
51
46
3
0
50
1.18

Tables:   1

The End!