Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000317.1 Hibiscus syriacus cultivar Beakdansim tig00000599_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75524

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
330--358
12
2.3
13
94
5
51
0
13
17
68
1.20
624--670
22
2.1
22
84
4
58
38
6
14
40
1.72
1430--1666
109
2.1
113
89
3
374
26
16
14
43
1.86
1295--1952
288
2.3
289
85
5
858
27
15
13
43
1.84
1716--2168
108
4.1
109
88
5
621
26
15
12
44
1.83
1716--2120
219
1.8
219
91
2
670
25
16
13
44
1.84
3504--3541
13
2.7
14
88
8
51
63
0
0
36
0.95
8696--8738
20
2.3
19
88
11
70
23
30
9
37
1.86
8701--8738
20
1.9
20
100
0
76
23
28
10
36
1.88
10073--10208
42
3.2
42
81
2
157
36
19
20
24
1.95
10242--10341
41
2.5
41
81
4
114
40
16
14
30
1.87
10267--10352
40
2.1
42
84
4
113
37
17
10
34
1.84
16982--17053
31
2.3
31
85
0
99
36
18
18
27
1.94
19346--19385
21
1.9
21
85
10
55
35
10
37
17
1.83
58496--58572
18
4.3
18
85
6
77
29
10
11
48
1.73
59480--59505
2
13.0
2
100
0
52
0
0
50
50
1.00
60246--60542
85
3.5
85
89
2
438
30
20
17
31
1.96
60599--60635
2
18.5
2
100
0
74
48
0
0
51
1.00
65800--65839
18
2.2
18
100
0
80
30
15
10
45
1.78
67991--68077
45
1.9
45
86
4
122
32
9
14
43
1.77
69224--69395
54
3.2
54
86
4
224
28
22
25
23
1.99

Tables:   1

The End!