Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003179.1 Hibiscus syriacus cultivar Beakdansim tig00006692_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  84358

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21437--21530
43
2.2
44
84
5
129
24
17
5
53
1.64
22084--22144
23
2.6
23
84
7
86
42
6
0
50
1.28
22084--22162
25
3.2
24
84
10
90
41
5
0
53
1.23
22131--22182
22
2.3
22
80
3
59
42
3
0
53
1.19
22144--22193
20
2.4
20
83
12
57
44
2
2
52
1.24
31404--31531
51
2.5
51
85
1
159
17
32
32
16
1.93
33847--33911
34
1.9
33
84
3
85
33
0
4
61
1.16
34040--34081
20
2.2
19
86
4
57
33
0
2
64
1.07
33954--34166
112
1.9
113
81
7
263
37
8
8
45
1.66
36272--36310
15
2.7
14
84
4
51
28
12
2
56
1.50
36288--36326
15
2.7
15
88
4
53
20
15
12
51
1.76
41844--42527
93
7.1
93
85
7
861
29
15
21
34
1.93
42223--42434
115
1.8
115
95
0
388
31
14
21
32
1.93
42129--42631
208
2.4
207
94
1
882
31
14
21
32
1.94
45174--45252
22
3.6
22
83
6
106
32
17
13
35
1.90
45702--45748
24
2.0
23
84
12
60
53
10
23
12
1.70
45691--46456
113
6.6
113
85
8
954
39
14
19
26
1.91
46143--46548
123
3.3
124
90
1
611
40
14
19
25
1.89
46711--46770
17
3.4
17
69
24
52
48
8
25
18
1.75
46436--46747
102
3.0
101
75
10
301
39
16
17
27
1.90
48205--48246
20
2.2
19
86
4
57
33
0
2
64
1.07
48119--48331
113
1.9
113
80
7
254
37
9
7
45
1.66
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50108--50204
14
6.9
14
72
9
54
27
0
34
38
1.57
50124--50177
21
2.6
21
80
8
74
24
0
31
44
1.54
50492--50541
21
2.4
21
80
16
59
12
6
6
76
1.16
53974--54028
16
3.4
16
76
0
65
25
25
14
34
1.94
54181--54241
30
2.0
30
84
12
81
50
0
1
47
1.10
55890--56056
22
7.3
23
74
15
100
43
4
5
46
1.47
56039--56083
20
2.2
20
84
0
54
42
11
6
40
1.67
55994--56045
2
26.0
2
100
0
104
50
0
0
50
1.00
58174--58221
18
2.7
18
93
0
78
31
29
14
25
1.95
67153--67197
21
2.1
22
87
4
65
20
26
28
24
1.99
73670--73758
23
3.8
24
75
18
89
20
26
24
28
1.99
74314--74354
21
1.9
22
85
5
57
21
19
31
26
1.97
74643--74685
14
3.1
14
93
0
68
11
11
18
58
1.63
74935--74977
22
1.9
23
85
4
61
4
6
25
62
1.40
74939--74981
13
3.2
13
81
15
52
4
9
25
60
1.47
79320--79401
43
1.9
43
100
0
164
52
20
8
18
1.71
82158--82185
3
9.3
3
100
0
56
32
0
0
67
0.91
83059--83090
14
2.3
14
94
0
55
25
37
31
6
1.81
83152--83229
29
2.7
29
97
0
147
24
24
34
16
1.95

Tables:   1

The End!