Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003183.1 Hibiscus syriacus cultivar Beakdansim tig00006699_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62767

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3858--3907
24
2.1
24
100
0
100
38
18
16
28
1.91
14485--14521
19
2.0
19
89
5
58
35
24
10
29
1.89
20585--20635
9
6.0
9
75
13
54
33
1
1
62
1.17
20578--20634
16
3.5
16
88
4
78
33
1
1
63
1.15
22298--22349
27
1.9
27
84
0
68
13
44
17
25
1.85
28364--28427
18
3.3
18
75
12
56
15
3
3
78
1.01
28394--28436
22
2.0
21
82
13
52
18
4
4
72
1.20
28370--28446
39
2.0
39
82
5
93
22
3
3
70
1.20
36572--36645
21
3.5
21
88
0
112
32
13
21
32
1.92
46795--46848
23
2.4
21
76
14
54
38
7
1
51
1.41
47449--47493
23
1.9
24
95
4
83
28
2
6
62
1.33
52486--52849
117
3.1
116
85
1
482
27
21
15
36
1.93
52834--52998
45
3.7
45
76
2
143
35
18
16
29
1.93
52835--53037
89
2.3
89
80
3
212
34
17
17
29
1.93
52835--53095
44
5.9
44
74
3
175
35
16
19
28
1.94
53913--53958
11
4.1
11
77
22
51
69
4
0
26
1.07
57189--57229
20
2.0
20
90
0
64
31
12
31
24
1.92
62486--62767
4
72.0
4
91
8
465
24
0
24
50
1.49

Tables:   1

The End!