Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003189.1 Hibiscus syriacus cultivar Beakdansim tig00006706_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60407

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3898--3934
18
2.1
18
89
0
56
56
2
2
37
1.28
4901--4939
20
2.0
20
89
0
60
38
20
28
12
1.89
21847--21877
12
2.6
12
94
0
53
22
48
19
9
1.78
21969--22027
25
2.4
25
88
0
82
28
11
22
37
1.89
24092--24130
17
2.4
17
91
4
62
30
0
0
69
0.89
24104--24169
25
2.5
25
78
7
69
33
3
0
63
1.10
25912--26031
58
2.1
58
85
0
159
21
6
27
44
1.77
31166--31268
38
2.8
37
86
2
136
46
6
5
40
1.54
31170--31403
35
6.4
36
75
11
158
46
5
6
42
1.51
31174--31408
72
3.3
71
73
16
182
47
5
6
41
1.51
31353--31499
67
2.2
66
76
12
160
47
4
5
42
1.45
31538--31579
14
2.9
15
85
3
59
21
2
0
76
0.90
55922--55968
2
24.5
2
83
16
64
46
2
0
51
1.13
55922--55968
9
5.3
9
89
5
69
46
2
0
51
1.13
55922--55986
33
2.1
29
83
11
76
44
3
1
50
1.26
56582--56617
15
2.4
15
85
0
54
44
2
0
52
1.15
57237--57268
2
16.5
2
93
6
57
53
0
0
46
1.00
57489--57535
26
1.9
25
83
12
62
40
8
17
34
1.79

Tables:   1

The End!