Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003197.1 Hibiscus syriacus cultivar Beakdansim tig00006728_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66051

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2972--3027
20
2.7
21
77
5
60
23
17
19
39
1.92
3582--3648
19
3.5
20
79
6
75
49
22
16
11
1.78
3574--3648
39
2.0
38
82
10
91
48
21
18
12
1.80
3644--3808
19
9.1
19
75
15
152
12
23
20
44
1.85
3649--3783
33
3.9
33
84
10
162
11
22
22
43
1.84
3649--3808
33
4.4
37
78
13
138
11
22
20
45
1.84
3643--3808
71
2.3
73
86
3
246
12
22
20
43
1.85
5939--5999
21
3.0
20
71
7
59
24
37
18
19
1.94
6895--7031
19
7.6
19
71
16
85
14
20
20
44
1.86
6900--6992
34
2.8
33
90
3
141
13
18
18
49
1.80
6986--7031
20
2.3
20
88
0
65
15
21
26
36
1.93
7505--7549
18
2.5
18
88
0
72
13
15
44
26
1.83
8863--8903
20
2.0
20
85
0
55
48
21
17
12
1.79
8871--8919
20
2.5
20
89
0
71
36
26
18
18
1.94
9453--9506
20
2.7
20
97
0
99
25
18
24
31
1.97
9392--9505
41
2.8
41
81
6
135
24
17
22
35
1.95
9392--9509
61
1.9
62
84
5
159
23
16
22
37
1.94
9577--9617
21
2.0
21
85
0
55
34
29
17
19
1.94
12239--12271
13
2.5
13
95
0
57
48
30
0
21
1.50
14292--14340
21
2.3
22
79
10
66
36
20
14
28
1.92
15093--15137
23
1.9
24
86
4
65
55
0
8
35
1.31
21066--21282
112
1.9
111
79
7
242
41
9
9
39
1.71
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21161--21218
22
2.5
22
76
15
55
51
0
1
46
1.11
22673--22740
3
22.0
3
82
5
82
60
1
0
38
1.06
22665--22746
15
5.9
14
77
17
82
58
1
0
40
1.06
22872--24194
76
17.4
76
97
0
2468
35
21
20
22
1.96
24872--24927
23
2.5
22
80
5
67
35
12
14
37
1.84
29321--29370
7
7.4
7
82
8
52
0
10
4
86
0.71
29319--29370
17
3.1
17
76
15
63
0
9
3
86
0.69
34617--34674
22
2.5
22
76
15
55
51
0
1
46
1.11
36117--36181
3
21.0
3
81
6
76
60
1
0
38
1.07
36109--36179
12
5.7
12
80
18
74
57
1
0
40
1.07
36109--36187
15
5.9
14
76
18
71
58
1
0
40
1.06
41129--41238
54
2.0
54
85
0
148
17
26
26
30
1.97
45582--45695
60
1.9
60
85
3
158
39
13
14
33
1.84
52441--52517
31
2.5
31
89
0
118
19
23
14
42
1.87
52529--52558
15
2.0
15
93
0
51
53
10
20
16
1.71

Tables:   1

The End!