Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000320.1 Hibiscus syriacus cultivar Beakdansim tig00000602_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65209

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
983--1032
24
2.2
22
92
7
82
40
0
4
56
1.18
3655--3730
36
2.1
36
82
7
91
44
1
2
51
1.23
7339--7409
25
2.9
25
87
4
92
47
0
5
46
1.26
7340--7414
23
3.2
22
84
7
87
46
0
5
48
1.25
7542--7576
18
1.9
18
100
0
70
45
20
0
34
1.51
9309--9423
59
1.9
60
94
1
205
33
21
12
33
1.90
10963--10991
2
15.0
2
92
7
51
48
0
0
51
1.00
11235--11271
18
2.1
18
94
0
65
51
0
0
48
1.00
12038--12093
24
2.3
24
93
0
94
21
8
10
58
1.58
12360--12399
20
2.0
20
85
0
53
10
12
20
57
1.63
20947--21097
43
3.5
43
85
2
171
27
10
6
54
1.59
21002--21098
43
2.3
43
98
0
185
29
10
9
50
1.67
20993--21414
43
9.8
42
74
12
161
25
16
9
48
1.76
21195--21262
22
3.1
22
64
26
54
23
22
5
48
1.72
21070--21419
43
8.1
44
75
13
241
25
18
8
47
1.76
21089--21419
87
3.9
85
76
13
263
25
18
9
47
1.77
28440--28486
19
2.5
19
100
0
94
44
10
4
40
1.59
34550--34598
24
2.0
25
84
7
66
8
26
0
65
1.20
35434--35458
13
1.9
13
100
0
50
64
0
4
32
1.12
37705--37752
15
3.2
15
90
0
78
8
16
66
8
1.42
39358--39390
13
2.5
13
95
0
57
75
3
0
21
0.93
39355--39398
21
2.1
21
86
0
61
75
4
0
20
0.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39377--39407
16
1.9
16
100
0
62
64
9
0
25
1.24
44988--45013
12
2.2
12
100
0
52
15
11
15
57
1.65
49760--49841
2
42.0
2
95
4
150
50
0
0
50
1.00
49762--49853
14
6.7
14
90
6
52
48
1
0
50
1.08
51706--51776
36
2.1
33
84
12
90
52
9
0
38
1.35
56081--56105
3
8.3
3
100
0
50
36
0
0
64
0.94
56519--56552
2
17.0
2
100
0
68
50
0
0
50
1.00
56933--56958
2
13.0
2
100
0
52
50
0
0
50
1.00
60193--60218
2
13.0
2
100
0
52
50
0
0
50
1.00
60789--60823
18
2.0
18
88
5
54
60
5
2
31
1.35

Tables:   1

The End!