Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000321.1 Hibiscus syriacus cultivar Beakdansim tig00000603_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32100

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
799--910
15
7.4
15
69
9
84
44
16
18
19
1.87
734--862
68
1.9
69
85
1
179
44
16
19
19
1.86
802--919
46
2.6
45
87
2
173
42
16
20
20
1.89
2804--2863
26
2.3
26
85
0
84
30
15
13
41
1.85
2789--2862
13
5.7
13
72
0
58
31
14
10
43
1.80
4215--4264
26
1.9
26
95
0
91
30
30
6
34
1.81
11874--11946
35
2.1
35
89
0
110
23
6
28
41
1.80
12428--12470
21
2.0
21
86
8
61
62
0
2
34
1.08
21552--21712
60
2.8
58
79
11
170
30
22
6
40
1.80
23597--23663
27
2.5
27
95
0
116
47
2
14
34
1.60
26261--26285
2
12.5
2
100
0
50
48
0
0
52
1.00
27708--27915
105
2.0
105
95
0
373
42
3
8
45
1.50

Tables:   1

The End!