Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003211.1 Hibiscus syriacus cultivar Beakdansim tig00006762_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  81424

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4239--4327
42
2.1
41
82
10
101
35
15
19
29
1.93
6500--6531
14
2.3
14
94
0
55
0
18
0
81
0.70
13492--13587
42
2.3
41
83
1
129
31
19
20
28
1.97
13484--13568
21
4.0
22
66
9
68
31
20
18
29
1.96
13491--14054
242
2.3
242
86
3
769
36
17
15
29
1.92
14131--14300
57
3.0
57
82
7
218
40
15
11
32
1.82
28271--28467
96
2.0
97
83
6
249
41
18
13
26
1.87
48089--48176
41
2.1
41
100
0
176
31
18
11
38
1.86
49660--49740
21
3.7
21
78
14
92
43
24
12
19
1.86
49654--49743
44
2.0
45
91
2
146
40
25
12
22
1.88
67758--67800
19
2.4
18
81
11
52
51
2
11
34
1.51
68323--68355
17
1.9
17
93
0
57
30
6
9
54
1.56
75759--75843
32
2.8
32
92
5
140
31
22
4
41
1.74
77159--77220
22
2.8
22
92
4
90
35
17
0
46
1.49
77175--77219
12
3.9
12
80
11
58
35
17
0
46
1.49
77260--77319
20
3.0
21
74
18
63
38
8
11
41
1.72

Tables:   1

The End!