Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003215.1 Hibiscus syriacus cultivar Beakdansim tig00006769_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45928

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2070--2186
35
3.2
37
86
8
161
45
18
4
31
1.69
2118--2178
21
3.2
21
63
29
55
44
21
3
31
1.68
6629--6783
35
4.3
36
88
5
226
43
18
5
32
1.72
6647--6810
70
2.3
70
83
8
208
42
17
6
32
1.76
13926--13958
16
2.1
16
100
0
66
30
15
24
30
1.95
14838--14899
27
2.3
27
85
0
79
45
0
0
54
0.99
14826--14886
3
20.7
3
83
9
54
40
0
0
59
0.98
17065--17122
28
2.1
27
84
6
73
32
5
1
60
1.29
27798--27825
10
2.8
10
100
0
56
89
0
10
0
0.49
27801--27841
18
2.3
18
86
0
55
82
0
17
0
0.66
28519--28858
115
3.0
114
90
2
520
35
15
17
31
1.91
29563--30120
116
5.0
112
81
7
650
37
14
18
29
1.90
30169--30219
17
3.1
17
72
16
61
47
9
21
21
1.79
30039--30315
117
2.4
117
86
4
362
39
16
18
25
1.91
30461--30500
3
13.7
3
85
15
57
32
0
0
67
0.91
36674--36750
31
2.5
31
78
2
82
27
27
27
18
1.98

Tables:   1

The End!