Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000322.1 Hibiscus syriacus cultivar Beakdansim tig00000604_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48312

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
804--854
22
2.3
22
100
0
102
21
25
23
29
1.99
3947--4128
45
4.0
45
96
0
328
40
7
22
30
1.81
3993--4066
25
3.2
25
62
31
63
39
8
22
29
1.83
6814--6932
10
12.4
9
71
19
73
80
1
13
4
0.93
6814--6932
16
7.8
15
78
13
93
80
1
13
4
0.93
6837--6932
38
2.5
38
77
17
101
80
2
13
4
0.95
6815--6932
23
4.8
24
75
19
93
80
1
13
4
0.94
10042--10090
23
2.0
24
85
14
66
42
2
6
48
1.39
19764--19810
12
3.7
12
78
15
58
6
72
8
12
1.27
19770--19822
15
3.7
15
78
14
67
7
75
7
9
1.19
19761--19822
27
2.3
27
100
0
124
6
75
8
9
1.18
24361--24932
284
2.0
284
96
0
1054
38
19
12
29
1.88
27023--27058
13
2.8
13
86
0
54
27
22
19
30
1.98
34313--34389
38
2.0
38
94
0
136
25
15
10
48
1.77
40782--40874
6
15.5
6
76
12
57
44
29
6
20
1.76
40841--40877
6
6.2
6
93
0
65
37
32
13
16
1.87

Tables:   1

The End!