Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003228.1 Hibiscus syriacus cultivar Beakdansim tig00006798_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35971

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
847--914
23
3.0
23
88
0
91
19
26
26
27
1.99
7647--7697
17
2.9
18
78
18
54
31
0
1
66
1.03
9538--9610
18
3.9
18
82
7
101
28
31
20
19
1.97
9537--9613
38
2.0
38
92
0
127
28
29
20
20
1.98
27923--27968
19
2.3
20
85
3
58
6
21
36
34
1.80
28080--28146
3
23.3
3
88
8
104
65
1
0
32
1.02
28080--28146
31
2.1
32
94
2
118
65
1
0
32
1.02
28080--28146
17
4.1
17
83
13
95
65
1
0
32
1.02
28561--28606
18
2.6
17
86
3
65
32
8
28
30
1.87
29158--29236
37
2.1
38
85
2
106
46
30
7
15
1.73

Tables:   1

The End!