Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003236.1 Hibiscus syriacus cultivar Beakdansim tig00006808_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62219

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6106--6168
32
2.0
32
90
6
101
44
0
0
55
0.99
6275--6315
19
2.1
20
95
4
75
48
0
14
36
1.44
6943--6968
10
2.6
10
100
0
52
53
19
19
7
1.68
7246--7277
14
2.1
16
88
11
50
50
15
15
18
1.79
13090--13171
41
2.0
41
97
0
155
45
12
9
32
1.74
26373--26412
21
2.0
19
85
9
53
15
35
10
40
1.80
27210--27364
44
3.5
44
92
0
238
26
26
20
26
1.99
33936--33978
10
4.3
10
80
8
52
62
0
4
32
1.15
33936--33978
21
2.2
19
87
8
59
62
0
4
32
1.15
39079--39113
16
2.2
16
89
0
52
20
5
5
68
1.31
39724--40071
174
2.0
174
86
0
480
27
11
29
30
1.92
48012--48059
2
24.0
2
100
0
96
50
0
0
50
1.00
49838--49879
2
21.0
2
88
9
59
45
0
4
50
1.23
50200--50283
23
3.7
23
85
3
116
20
23
26
29
1.99
51037--51071
13
2.7
13
95
0
61
28
20
17
34
1.95
51050--51215
85
2.0
85
90
0
260
29
21
17
31
1.96
57594--57691
24
4.1
24
93
2
162
40
33
20
5
1.74

Tables:   1

The End!