Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000324.1 Hibiscus syriacus cultivar Beakdansim tig00000606_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61221

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1743--1807
26
2.5
26
97
0
121
46
4
12
36
1.62
2122--2165
10
4.7
9
81
18
54
61
2
0
36
1.09
29366--29420
24
2.3
25
75
9
60
9
14
27
49
1.73
29376--29408
14
2.4
14
94
0
57
6
12
27
54
1.60
29401--29441
14
2.9
14
92
0
64
12
12
17
58
1.63
29377--29428
24
2.2
24
89
0
77
7
11
25
55
1.61
30177--30243
16
4.3
16
88
3
93
16
10
13
59
1.60
30167--30239
32
2.6
27
76
19
76
15
10
15
58
1.62
32390--32465
28
2.7
28
93
4
127
50
0
0
50
1.00
32524--32580
28
2.1
28
83
9
73
43
0
1
54
1.10
37514--37567
20
2.7
20
94
0
99
25
25
7
40
1.82
36924--38202
677
1.9
680
88
3
1972
36
15
10
37
1.82
53366--53454
34
2.5
34
83
5
97
25
31
30
12
1.92
53418--53502
33
2.6
34
88
7
122
27
25
38
8
1.84
53506--53562
29
2.0
29
92
0
96
21
28
33
17
1.96
53620--53675
29
1.9
29
92
7
96
23
28
32
16
1.96

Tables:   1

The End!