Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003243.1 Hibiscus syriacus cultivar Beakdansim tig00006820_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71951

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1459--1497
18
2.1
18
85
9
51
30
5
17
46
1.70
1711--1753
21
2.0
21
86
0
59
32
30
23
13
1.93
2283--2583
149
2.0
147
92
3
507
27
16
19
36
1.93
2562--2606
23
2.0
23
81
0
54
20
22
28
28
1.98
11820--11853
3
11.3
3
100
0
68
64
0
0
35
0.94
13916--14031
60
1.9
60
85
0
160
41
13
11
33
1.80
14431--14487
21
2.7
21
97
0
105
50
5
5
38
1.47
19153--19192
21
1.9
21
100
0
80
30
25
35
10
1.88
22397--22430
16
2.1
16
88
0
50
32
11
26
29
1.92
26176--26220
20
2.2
20
100
0
90
33
28
17
20
1.95
28240--28285
18
2.6
17
82
3
56
28
30
4
36
1.76
31246--31319
20
3.7
20
78
3
94
14
21
24
39
1.91
31438--31472
5
6.6
5
96
3
52
25
54
20
0
1.45
34137--34173
15
2.5
15
100
0
74
24
29
35
10
1.89
34181--34289
43
2.5
46
83
10
163
30
19
27
22
1.98
34201--34338
43
3.2
43
89
2
197
30
21
24
23
1.99
35463--35505
19
2.1
20
83
12
52
55
4
11
27
1.55
37019--37169
42
3.7
40
71
15
128
31
20
16
31
1.95
37008--37210
83
2.5
82
86
2
280
31
20
16
32
1.94
37055--37236
83
2.2
82
82
7
199
31
18
15
34
1.93
45238--45279
16
2.6
16
88
7
59
71
2
4
21
1.16
46274--46303
16
1.9
15
93
6
51
16
26
36
20
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46502--46543
9
4.4
10
82
11
61
71
0
2
26
0.98
46558--46862
37
8.1
36
80
9
299
44
5
3
46
1.44
46558--46862
76
4.0
74
83
8
348
44
5
3
46
1.44
48744--49306
250
2.2
247
87
9
809
28
11
17
42
1.84
49641--49687
18
2.7
18
86
3
69
27
29
8
34
1.87
50313--50346
16
2.2
16
89
5
52
23
17
8
50
1.74
63660--63773
59
1.9
59
91
3
185
34
13
23
28
1.92
71526--71575
3
17.3
3
80
15
61
72
0
0
28
0.86
71519--71576
23
2.4
24
85
8
82
72
0
1
25
0.94

Tables:   1

The End!