Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003246.1 Hibiscus syriacus cultivar Beakdansim tig00006823_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73645

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3459--3495
15
2.5
15
95
0
65
37
40
2
18
1.65
9932--9962
6
5.2
6
100
0
62
16
0
19
64
1.29
17445--17483
19
2.1
19
95
0
69
46
25
7
20
1.77
17991--18020
15
1.9
15
93
6
51
26
0
0
73
0.84
17983--18023
22
1.9
21
85
5
55
21
0
2
75
0.92
20499--20540
20
2.1
20
95
0
75
16
26
23
33
1.96
20519--20972
205
2.2
205
95
0
818
22
21
22
33
1.97
21597--21778
95
1.9
94
90
1
292
30
28
11
29
1.92
33002--33048
14
3.3
14
77
16
60
61
0
2
36
1.08
33003--33050
15
3.3
15
80
13
64
62
0
2
35
1.07
33111--33177
30
2.2
30
94
0
116
59
2
8
28
1.42
34119--34210
28
3.3
27
77
6
103
45
38
0
16
1.47
35359--35399
20
2.2
20
82
8
50
48
0
4
46
1.23
38784--38980
40
4.9
40
69
7
123
40
15
15
28
1.88
41531--41586
27
2.1
27
93
0
94
12
14
25
48
1.78
46695--47723
165
6.2
164
83
5
956
24
21
24
29
1.99
46716--47723
413
2.4
413
94
1
1777
24
21
24
29
1.99
46798--47749
249
3.8
248
87
3
946
24
21
24
29
1.99
50804--50848
19
2.4
19
92
3
74
66
8
13
11
1.44
53961--54025
31
2.1
31
97
0
121
26
29
7
36
1.84
54578--54615
15
2.6
15
87
4
51
55
2
0
42
1.14
54831--54933
54
1.9
54
84
7
138
25
28
16
30
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57078--57104
2
13.5
2
100
0
54
48
0
0
51
1.00
67349--68463
282
3.9
279
84
6
1293
36
23
12
28
1.91
69760--69791
15
2.0
17
88
11
50
28
3
6
62
1.34
70902--70975
33
2.2
35
90
4
116
35
1
24
39
1.64
73556--73613
20
2.8
21
73
2
64
24
18
32
24
1.97

Tables:   1

The End!