Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003248.1 Hibiscus syriacus cultivar Beakdansim tig00006829_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72141

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8798--8900
31
3.4
31
95
2
190
33
5
6
53
1.52
17585--17625
20
2.0
21
90
4
66
75
2
4
17
1.08
18221--18252
2
15.5
2
93
6
55
50
3
0
46
1.17
21330--21369
18
2.2
18
86
0
53
27
12
2
57
1.48
23973--24012
21
1.9
21
89
0
62
40
20
17
22
1.92
28347--28401
21
2.6
22
75
16
62
60
0
0
40
0.97
28840--28872
2
16.5
2
100
0
66
51
0
0
48
1.00
32435--32472
20
1.9
20
94
0
67
28
26
5
39
1.78
37993--38048
28
2.0
28
96
0
103
46
10
8
33
1.70
38024--39064
264
3.9
262
86
2
1323
35
15
9
38
1.80
38024--39060
528
2.0
529
87
2
1494
36
15
9
38
1.80
38880--39427
188
3.0
187
81
6
580
34
14
9
41
1.78
40759--40877
46
2.6
47
77
6
125
36
13
4
46
1.63
40806--40952
79
1.9
79
85
2
206
36
9
5
48
1.59
47053--47083
2
15.5
2
100
0
62
51
0
0
48
1.00
64401--64497
44
2.1
46
86
5
135
26
11
22
39
1.88

Tables:   1

The End!