Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003249.1 Hibiscus syriacus cultivar Beakdansim tig00006830_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55143

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
397--1066
219
3.1
219
88
5
968
31
20
17
30
1.95
2135--2289
54
2.9
54
86
0
229
27
25
13
33
1.93
6827--6864
14
2.6
15
83
4
51
50
10
18
21
1.76
9757--10044
146
2.0
143
81
6
335
45
7
6
39
1.60
11510--11599
3
30.0
3
97
0
171
65
0
0
34
0.93
11770--11871
42
2.5
42
80
1
116
25
22
19
32
1.97
11770--11883
42
2.7
43
74
8
110
26
21
18
34
1.96
11643--12982
259
5.2
258
83
3
1590
33
15
16
34
1.91
11643--12994
517
2.6
516
84
3
1671
33
15
16
34
1.91
12803--12905
41
2.5
41
76
6
118
25
20
21
33
1.97
13730--14080
132
2.7
131
77
10
356
32
21
19
26
1.97
14374--14411
2
19.5
2
83
5
51
44
0
5
50
1.24
16482--16538
2
28.5
2
100
0
114
49
0
0
50
1.00
18062--18448
183
2.1
184
92
2
638
43
3
8
45
1.49
22157--22185
9
3.2
9
100
0
58
31
37
0
31
1.58
32371--32842
42
11.4
42
78
9
405
27
17
15
39
1.90
32373--32863
126
3.9
128
78
9
478
27
17
15
39
1.90
32676--32751
38
2.0
38
89
0
116
25
14
17
43
1.86
32682--32792
38
2.9
38
82
0
114
26
14
17
42
1.87
32872--33022
45
3.4
43
76
6
149
25
17
19
37
1.93
32849--33021
90
1.9
90
82
4
215
26
17
18
38
1.92
35716--35781
32
2.1
32
83
11
82
18
7
10
63
1.49
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36067--36095
9
3.3
9
90
9
51
20
0
0
79
0.74
41785--41912
25
5.1
25
76
7
116
29
2
14
53
1.54
41799--41912
50
2.3
50
83
11
153
28
1
15
54
1.52
45251--45290
2
20.0
2
84
0
53
42
0
7
50
1.30
45260--45307
20
2.5
20
96
3
89
35
0
12
52
1.40
45268--45302
4
8.8
4
93
0
52
31
0
17
51
1.45
45302--45326
13
1.9
13
100
0
50
40
0
4
56
1.18
45347--45384
19
2.0
19
90
10
60
39
0
7
52
1.31
45634--45674
14
2.7
15
85
14
57
36
0
7
56
1.27
45625--45673
23
2.1
24
85
11
66
34
0
8
57
1.29
45756--45793
17
2.2
18
85
4
51
18
2
7
71
1.23
51814--51866
17
3.1
17
88
0
79
37
15
5
41
1.70
51796--51866
34
2.1
34
83
0
88
35
14
11
39
1.81

Tables:   1

The End!