Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000325.1 Hibiscus syriacus cultivar Beakdansim tig00000607_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51694

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4868--4996
63
2.1
62
82
5
154
47
5
3
43
1.44
13213--13238
2
13.0
2
100
0
52
50
0
0
50
1.00
16568--16593
2
13.0
2
100
0
52
50
0
0
50
1.00
19545--19583
2
19.5
2
100
0
78
48
0
0
51
1.00
22544--22579
18
1.9
19
88
5
56
63
5
0
30
1.17
30279--30349
34
2.1
34
82
12
83
46
18
11
23
1.81
31288--31370
42
2.0
42
95
0
148
15
16
3
63
1.44
38585--38649
30
2.3
26
76
20
69
26
10
15
47
1.78
38593--38652
30
2.0
29
90
3
93
20
11
20
48
1.80
38595--38660
29
2.2
30
86
2
98
19
12
18
50
1.78
38933--38988
27
2.1
27
93
0
94
26
12
26
33
1.92
39764--39817
13
4.0
14
74
13
51
81
7
3
7
0.97
39760--39810
26
2.0
25
88
7
75
80
5
5
7
1.02
45622--45667
23
2.0
23
91
0
74
15
23
26
34
1.94

Tables:   1

The End!