Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003254.1 Hibiscus syriacus cultivar Beakdansim tig00006839_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29100

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6118--6253
63
2.2
63
90
0
209
30
19
23
26
1.98
6118--6283
63
2.6
63
83
5
194
31
19
22
25
1.98
6308--6365
20
2.6
23
78
18
77
29
20
25
24
1.99
6692--6754
28
2.2
28
85
5
81
39
4
23
31
1.76
6963--7023
23
2.7
23
78
0
68
21
24
24
29
1.99
13545--13613
30
2.3
30
92
0
111
39
4
23
33
1.74
13823--13888
23
2.9
23
83
0
78
22
27
22
27
1.99
14662--14745
32
2.6
33
77
7
102
30
23
25
20
1.98
16735--16769
17
2.1
17
88
0
52
40
5
14
40
1.69
16744--16787
16
2.6
17
82
7
54
38
9
18
34
1.82
19355--19415
26
2.3
26
91
0
104
19
21
9
49
1.77
20250--20307
29
2.0
29
93
0
98
18
12
10
58
1.61
25378--25509
38
3.4
38
84
8
151
46
3
4
45
1.38
25416--25481
19
3.4
18
69
15
60
50
0
3
46
1.16
26090--26161
2
36.5
2
97
2
137
50
0
0
50
1.00
26212--26386
34
5.0
34
73
10
138
45
2
5
46
1.37
26253--26386
68
1.9
72
87
7
204
47
2
3
45
1.35
26142--26396
34
7.1
34
70
14
131
45
3
6
45
1.44
27855--27883
13
2.2
13
100
0
58
34
0
0
65
0.93

Tables:   1

The End!