Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003258.1 Hibiscus syriacus cultivar Beakdansim tig00006847_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  81713

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
169--421
139
1.8
138
82
7
325
32
14
16
36
1.89
2633--2671
6
6.5
6
100
0
78
51
0
48
0
1.00
2638--2677
18
2.2
18
90
0
62
55
2
42
0
1.13
8442--8473
3
10.7
3
93
0
55
34
0
34
31
1.58
10453--10487
12
2.9
12
82
0
52
80
2
2
14
0.95
20664--20795
44
3.0
44
97
1
248
47
15
15
21
1.82
23198--23275
27
2.8
28
70
16
72
52
5
2
39
1.37
31051--31082
16
2.0
16
93
0
55
34
25
6
34
1.81
34580--34606
13
2.1
13
100
0
54
37
14
25
22
1.93
34982--35013
14
2.4
14
94
5
57
65
0
3
31
1.08
38359--38403
22
2.0
22
86
0
63
20
15
17
46
1.84
38968--39011
23
1.9
23
90
0
70
22
6
38
31
1.81
38972--39022
23
2.2
23
82
0
57
19
9
41
29
1.84
47442--47505
17
3.5
19
78
18
82
3
14
31
51
1.57
52414--52527
61
1.9
60
82
8
142
44
6
10
38
1.64
62616--62653
20
1.9
20
88
0
58
31
0
18
50
1.47
65917--66039
31
4.0
31
90
2
185
36
23
20
19
1.95
66843--66887
21
2.1
21
84
8
56
17
24
26
31
1.97
69763--69800
20
1.9
19
89
5
58
68
0
23
7
1.16
72226--72312
30
2.9
30
87
0
93
55
5
2
36
1.37
73645--73684
2
20.0
2
100
0
80
50
0
0
50
1.00
74176--74239
11
6.6
10
75
16
55
51
1
0
46
1.10
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74178--74263
22
4.2
20
70
16
59
51
3
0
45
1.18

Tables:   1

The End!