Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003261.1 Hibiscus syriacus cultivar Beakdansim tig00006855_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59572

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7537--7579
21
2.0
23
86
9
63
60
20
9
9
1.55
8583--8608
12
2.2
12
100
0
52
50
19
7
23
1.73
8598--8684
43
2.1
43
93
4
151
56
13
3
26
1.54
17528--18081
93
6.0
92
80
3
513
35
9
16
38
1.81
17528--18068
187
2.9
185
78
5
529
35
8
17
38
1.80
19540--19574
16
2.1
17
94
5
63
65
14
8
11
1.46
21090--21278
29
6.6
29
76
10
181
38
14
21
25
1.91
23784--23820
11
3.4
11
96
0
65
59
0
0
40
0.97
23784--23838
22
2.5
22
85
2
67
52
0
0
47
1.00
24180--24222
19
2.3
19
84
8
52
62
6
0
30
1.21
37449--37482
2
17.0
2
93
0
59
50
2
0
47
1.16
43408--43451
22
2.0
22
86
0
61
54
25
13
6
1.63
44087--44122
16
2.2
17
90
5
56
27
0
2
69
1.02
48999--49037
6
6.5
6
100
0
78
51
0
48
0
1.00
49004--49043
18
2.2
18
90
0
62
55
2
42
0
1.13
54813--54844
3
10.7
3
93
0
55
34
0
34
31
1.58
56818--56851
11
3.0
11
83
8
50
76
2
2
17
1.04

Tables:   1

The End!