Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003265.1 Hibiscus syriacus cultivar Beakdansim tig00006862_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52213

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8262--8306
20
2.2
20
92
0
72
22
22
11
44
1.84
17600--17675
40
1.9
38
92
5
125
64
7
5
22
1.40
19188--19219
15
2.1
15
94
0
55
37
9
6
46
1.61
19717--19756
14
2.9
14
80
0
53
50
10
10
30
1.69
19984--20249
138
1.9
138
86
3
383
39
8
8
43
1.65
20296--20346
27
1.9
27
84
11
70
47
7
1
43
1.43
20444--20490
2
23.5
2
95
0
85
48
0
0
51
1.00
24151--24216
2
33.0
2
100
0
132
50
0
0
50
1.00
28008--28048
20
2.0
20
100
0
82
34
21
29
14
1.93
28215--28300
15
6.0
15
66
14
56
44
1
2
52
1.21
31262--31443
45
4.1
45
88
0
258
40
7
21
30
1.81
33348--33372
5
5.0
5
100
0
50
20
0
20
60
1.37
34323--34356
18
1.9
18
88
5
52
67
0
8
23
1.18
36266--36325
20
3.2
19
79
6
68
58
0
0
41
0.98
37415--37449
2
17.5
2
93
0
61
48
0
0
51
1.00
37630--37663
11
3.0
11
87
8
50
67
0
2
29
1.05
37630--37664
12
3.0
12
91
4
54
65
0
2
31
1.07
37970--38011
21
2.0
22
90
4
68
28
16
23
30
1.96
38066--38110
22
2.0
22
86
0
63
20
17
24
37
1.93
38224--38278
6
9.5
6
98
2
96
30
52
16
0
1.44
38765--38791
5
5.4
5
100
0
54
0
40
22
37
1.54
38929--39105
22
8.4
22
74
13
167
38
25
18
16
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38986--39148
20
7.9
20
74
15
127
39
23
22
14
1.90
38951--39125
41
4.2
42
91
2
266
40
24
19
16
1.91
38951--39125
83
2.1
82
89
4
262
40
24
19
16
1.91
40465--40518
3
18.3
3
88
3
83
61
1
0
37
1.07
40692--40920
45
5.1
45
91
0
361
34
20
22
23
1.97
40854--40996
76
1.9
74
87
5
207
34
20
20
23
1.96
40928--41041
45
2.5
45
91
5
176
30
21
21
25
1.99
40809--41238
121
3.6
121
88
1
596
34
20
20
24
1.97
40976--41117
76
1.9
74
86
2
203
33
19
19
27
1.96
41050--41162
45
2.5
45
83
2
127
31
20
19
28
1.97
41104--41314
76
2.8
76
91
0
323
34
20
18
25
1.96
42004--42077
22
3.4
22
90
0
112
39
12
17
31
1.86
43666--43805
75
1.9
75
89
3
219
30
20
16
32
1.95
51683--51716
11
3.0
11
87
8
50
67
0
2
29
1.05
51683--51717
12
3.0
12
91
4
54
65
0
2
31
1.07

Tables:   1

The End!