Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003275.1 Hibiscus syriacus cultivar Beakdansim tig00006886_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74467

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5739--5841
26
4.0
26
87
0
152
24
14
28
33
1.94
6760--6962
103
2.0
103
87
1
291
32
15
22
29
1.95
7013--7063
23
2.3
23
86
3
68
45
0
3
50
1.20
11213--11305
2
47.0
2
95
2
170
50
1
0
48
1.07
15714--15832
59
2.0
60
96
1
222
39
6
19
34
1.78
15739--15831
29
3.2
29
62
14
73
40
7
19
32
1.79
18100--18630
54
9.8
54
87
2
692
33
13
16
36
1.88
23522--24024
54
9.3
54
91
1
776
32
11
17
38
1.86
28739--28788
22
2.3
22
89
3
75
48
0
8
44
1.32
29546--29588
23
1.9
23
85
4
61
27
11
16
44
1.82
30589--30636
13
3.7
13
85
0
60
41
10
14
33
1.80
30581--30645
13
5.0
13
80
0
58
40
13
16
29
1.88
30587--30645
26
2.3
26
75
0
64
37
15
16
30
1.90
35640--35708
27
2.5
28
84
11
81
26
1
1
71
1.03
37676--37723
22
2.2
22
88
7
71
41
6
2
50
1.39
45530--45569
21
1.9
21
89
0
62
25
40
25
10
1.86
45985--46025
19
2.2
19
83
16
50
29
0
17
53
1.44
52081--52120
19
2.1
19
100
0
80
17
5
10
67
1.37
52533--52566
11
3.0
11
91
4
50
70
0
2
26
1.01

Tables:   1

The End!