Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000328.1 Hibiscus syriacus cultivar Beakdansim tig00000611_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  82400

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
813--841
2
15.0
2
92
7
51
48
0
0
51
1.00
814--839
13
2.0
13
100
0
52
46
0
0
53
1.00
813--842
15
2.0
15
100
0
60
46
0
0
53
1.00
807--841
17
2.1
17
94
0
61
48
0
0
51
1.00
9929--10001
36
2.0
37
94
2
130
32
32
10
23
1.89
18342--18400
30
2.0
30
83
12
77
40
0
5
54
1.23
28637--28684
18
2.7
18
77
9
53
43
0
2
54
1.12
28657--28742
37
2.6
31
73
21
84
47
2
0
50
1.14
29191--29230
21
1.9
21
84
0
53
40
2
2
55
1.27
31221--31263
21
2.0
21
86
0
59
65
4
0
30
1.13
31260--31291
15
2.0
17
88
11
50
46
6
15
31
1.71
31287--31329
21
2.0
21
81
0
50
53
6
6
32
1.55
31830--31872
3
14.3
3
100
0
86
32
0
0
67
0.91
36104--36169
24
2.7
26
79
15
77
54
0
0
45
0.99
36122--36161
19
2.1
19
85
0
53
55
0
0
45
0.99
37664--38166
253
2.0
253
96
0
934
29
24
16
29
1.96
39130--39164
11
3.2
11
91
0
61
0
2
8
88
0.61
39921--39983
2
31.5
2
100
0
126
50
0
0
49
1.00
46397--46427
2
15.5
2
100
0
62
48
0
0
51
1.00
56961--56995
18
1.9
18
88
11
54
62
0
0
37
0.95
57460--57493
15
2.3
15
90
10
52
2
14
0
82
0.79
57493--57575
4
21.0
4
87
2
114
26
4
0
68
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74840--74898
2
29.5
2
100
0
118
50
0
0
49
1.00

Tables:   1

The End!