Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003284.1 Hibiscus syriacus cultivar Beakdansim tig00006912_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62335

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9679--10136
65
7.0
65
84
3
488
23
26
15
34
1.94
9679--10127
197
2.3
195
83
2
567
23
26
15
34
1.94
18470--18498
13
2.2
13
100
0
58
72
0
0
27
0.85
18623--18785
80
2.0
80
100
0
326
24
18
17
39
1.91
22019--22053
17
1.9
19
88
11
56
31
8
34
25
1.86
29270--29295
2
13.0
2
100
0
52
50
50
0
0
1.00
41959--42012
26
2.2
24
87
12
74
77
0
12
9
0.98
41874--42007
47
2.8
46
79
10
112
72
0
18
8
1.14
43288--43358
37
1.9
37
97
0
133
36
16
23
22
1.94
43376--43741
55
6.8
55
75
10
279
30
16
22
30
1.96
43376--43741
159
2.3
163
79
8
383
30
16
22
30
1.96
43998--44050
23
2.3
23
79
17
58
37
0
9
52
1.34
55744--55768
11
2.3
11
100
0
50
28
0
0
72
0.86
60826--60851
13
2.0
13
100
0
52
7
15
38
38
1.76

Tables:   1

The End!