Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003293.1 Hibiscus syriacus cultivar Beakdansim tig00006924_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65118

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6805--6854
24
2.1
24
96
0
91
42
12
10
36
1.76
12391--12465
31
2.4
33
77
8
84
32
16
22
29
1.95
16111--16137
2
13.5
2
100
0
54
51
0
0
48
1.00
18837--18877
16
2.6
16
88
3
57
43
7
14
34
1.73
19763--19803
18
2.3
18
87
8
57
46
12
17
24
1.82
21242--21276
18
1.9
18
88
0
52
65
0
8
25
1.21
21435--21747
157
2.0
156
98
0
599
52
8
10
28
1.65
23571--23598
2
14.0
2
100
0
56
50
0
0
50
1.00
35205--35236
13
2.5
13
95
5
57
46
0
0
53
1.00
36440--36490
19
2.6
20
90
3
77
43
23
17
15
1.88
36440--36757
20
15.6
20
78
7
165
38
18
22
19
1.93
36565--36755
40
4.7
40
85
3
238
36
16
24
22
1.94
36544--36722
83
2.2
83
90
0
277
35
16
24
22
1.95
36744--36787
20
2.2
20
91
0
70
54
15
18
11
1.70
36865--36914
6
8.5
6
97
2
93
32
52
16
0
1.44
37598--37687
6
15.5
6
98
1
159
0
16
52
31
1.44
37775--38009
20
11.6
20
78
7
143
17
22
20
40
1.92
37777--37884
40
2.7
40
89
0
162
19
25
18
37
1.94
37959--38009
19
2.6
20
90
3
77
15
17
23
43
1.88
38264--38354
26
3.5
26
83
4
114
38
28
9
23
1.86
41317--41368
2
26.0
2
100
0
104
50
0
0
50
1.00
42538--42627
34
2.6
36
91
3
148
31
10
16
42
1.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42755--42911
65
2.4
65
82
4
183
40
12
17
29
1.86
42876--42962
37
2.4
37
88
0
120
39
16
19
25
1.92
42802--43060
103
2.5
102
85
3
340
38
12
17
30
1.87
43035--43084
21
2.4
21
89
0
73
38
10
26
26
1.87
44482--44835
183
1.9
183
93
1
611
30
20
21
28
1.98
49997--50036
21
1.9
21
90
10
64
47
0
0
52
1.00
50237--50392
79
2.0
79
85
6
210
37
15
8
38
1.79
51232--51583
36
9.8
36
93
0
560
16
28
23
30
1.96
53153--53181
15
1.9
15
100
0
58
48
24
13
13
1.79
53154--53190
15
2.5
15
90
0
56
54
21
10
13
1.69

Tables:   1

The End!