Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003295.1 Hibiscus syriacus cultivar Beakdansim tig00006930_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39668

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25--53
12
2.4
12
100
0
58
34
13
34
17
1.89
1264--2200
183
5.1
183
93
0
1581
35
14
16
33
1.89
5537--5584
23
2.1
23
92
0
78
35
16
10
37
1.83
5537--5776
87
2.8
87
95
0
426
33
14
8
43
1.76
5611--5671
23
2.7
23
84
0
68
32
13
8
45
1.72
6256--6298
17
2.4
19
81
14
56
41
0
0
58
0.98
8883--8972
30
3.0
29
82
10
103
42
7
17
32
1.78
11780--11845
28
2.4
28
94
0
114
40
9
19
30
1.83
14745--14846
53
2.0
49
86
7
141
32
6
18
42
1.77
21231--21281
2
25.5
2
100
0
102
50
0
0
49
1.00
22208--22234
2
13.5
2
100
0
54
48
0
0
51
1.00
33613--33646
11
3.1
11
95
0
59
2
8
50
38
1.49
34726--34841
59
2.0
59
80
0
133
39
10
12
37
1.78
35141--35175
12
3.0
11
88
12
52
54
0
2
42
1.15

Tables:   1

The End!