Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003297.1 Hibiscus syriacus cultivar Beakdansim tig00006934_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54902

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5991--6069
28
2.9
27
83
9
81
68
5
2
24
1.22
6063--6111
15
3.1
15
80
16
55
63
2
12
22
1.39
7841--7915
37
2.0
37
100
0
150
24
5
32
38
1.78
8667--8728
32
1.9
32
93
0
106
45
11
24
19
1.83
9839--9905
34
2.0
33
97
2
125
59
1
0
38
1.06
10467--10560
36
2.6
36
83
3
118
23
26
21
28
1.99
13910--13981
29
2.5
30
80
11
78
33
15
5
45
1.69
16782--16835
19
2.8
19
85
0
63
35
12
1
50
1.52
21908--21985
31
2.5
30
81
8
84
37
12
23
26
1.91
26651--26697
24
2.0
23
87
4
67
29
14
10
44
1.79
26821--26860
20
2.0
20
90
0
62
37
22
7
32
1.82
34278--34361
36
2.3
36
93
0
141
46
7
28
17
1.75
38181--38214
10
3.5
10
92
4
52
17
2
0
79
0.86
45532--45578
24
2.0
23
87
4
67
29
14
10
44
1.79

Tables:   1

The End!