Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000330.1 Hibiscus syriacus cultivar Beakdansim tig00000613_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63511

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8826--8883
30
1.9
30
96
0
107
20
8
18
51
1.72
8982--9039
27
2.1
27
96
0
107
37
5
12
44
1.64
16385--16419
13
2.6
13
95
4
61
45
0
0
54
0.99
16386--16459
20
3.8
20
74
13
75
40
0
1
58
1.07
16386--16419
7
5.0
7
92
7
61
44
0
0
55
0.99
27308--27348
22
2.0
20
85
9
55
46
9
0
43
1.36
29184--29235
2
26.0
2
100
0
104
50
0
0
50
1.00
29478--29528
26
2.0
25
84
3
66
25
7
1
64
1.31
34550--34637
40
2.2
41
95
2
160
20
21
13
44
1.86
35035--35076
18
2.4
18
88
4
59
28
7
2
61
1.35
36759--36802
18
2.4
18
88
0
70
29
22
20
27
1.99
37394--37480
35
2.5
34
80
12
97
26
8
9
56
1.58
40793--40821
12
2.3
13
94
5
51
62
6
3
27
1.37
41104--41222
51
2.3
50
81
8
132
26
26
31
15
1.96
41962--42008
23
2.0
23
91
4
76
17
14
8
59
1.59
45296--45388
37
2.5
37
83
0
123
41
10
12
34
1.78
45942--45980
20
2.0
20
94
0
69
30
5
0
64
1.15
46017--46050
13
2.7
12
86
13
50
14
0
0
85
0.60
46066--46105
12
3.6
11
87
9
55
25
5
5
65
1.34
46585--46703
11
10.2
11
67
16
53
21
4
5
69
1.24
50337--50411
22
3.4
22
94
0
132
37
28
13
21
1.91
51229--52496
106
12.0
106
88
2
1802
34
24
17
23
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
53227--53331
37
2.8
37
79
0
120
40
12
13
33
1.82
53994--54023
12
2.6
11
94
5
51
23
6
6
63
1.43
53990--54040
23
2.2
24
74
19
56
21
3
5
68
1.27
54041--54073
2
16.5
2
100
0
66
48
0
0
51
1.00
54506--54634
26
5.1
26
67
22
69
20
4
3
71
1.20
57712--57760
23
2.1
24
81
11
57
36
6
0
57
1.24
59395--59446
2
26.5
2
96
3
97
48
0
0
51
1.00
60013--60062
23
2.2
23
81
0
55
38
2
4
56
1.30

Tables:   1

The End!