Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000331.1 Hibiscus syriacus cultivar Beakdansim tig00000615_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73537

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4606--4682
21
3.7
21
94
0
136
45
23
29
1
1.61
5086--5423
43
7.9
43
81
3
279
34
23
16
25
1.95
29997--30043
17
2.8
17
81
12
53
29
21
0
48
1.50
34059--34145
25
3.6
24
68
21
65
51
1
0
47
1.08
39158--39296
72
1.9
72
82
5
174
38
12
18
29
1.88
39296--39639
170
2.0
170
91
1
555
36
18
15
30
1.91
50178--50216
2
19.0
2
94
5
69
2
48
0
48
1.15
59740--59781
13
3.2
13
83
10
50
16
40
21
21
1.91
59717--59762
18
2.6
18
89
0
74
17
50
19
13
1.78
59745--59796
13
3.9
13
82
12
54
15
34
25
25
1.95
59760--59796
7
5.4
7
81
18
51
13
32
27
27
1.94
62315--62409
24
4.0
24
81
0
109
21
12
17
48
1.80
62338--62407
12
5.8
12
76
6
70
15
14
18
51
1.77
62301--62409
48
2.3
48
85
3
139
20
14
17
47
1.82
62569--62605
2
18.5
2
100
0
74
48
0
0
51
1.00

Tables:   1

The End!