Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003315.1 Hibiscus syriacus cultivar Beakdansim tig00006977_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71513

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1654--1699
23
2.0
23
86
0
65
28
8
15
47
1.74
1860--2195
159
2.1
158
89
2
503
28
16
14
40
1.88
3159--3196
15
2.5
15
86
0
58
21
2
26
50
1.62
4452--4489
20
1.9
20
88
0
58
36
34
26
2
1.71
10980--11020
18
2.3
18
86
0
55
2
43
4
48
1.37
13309--13343
13
2.7
13
100
0
70
0
48
11
40
1.39
14219--14251
3
11.0
3
100
0
66
66
0
0
33
0.92
14280--14438
81
2.0
81
83
6
205
44
9
3
43
1.52
14276--14452
40
4.5
39
72
10
128
43
9
3
44
1.52
14429--14474
25
1.9
25
91
8
78
47
6
6
39
1.55
14423--14491
23
2.8
25
78
8
79
49
5
4
40
1.47
16720--16752
17
1.9
17
88
11
50
75
3
0
21
0.93
26027--26055
2
14.5
2
100
0
58
0
51
0
48
1.00
30295--30515
64
3.5
64
83
4
209
34
20
17
26
1.95
31172--31327
31
5.0
31
94
1
260
19
18
22
39
1.93
31625--31666
6
7.0
6
100
0
84
33
0
16
50
1.46
34485--34705
64
3.5
64
83
4
218
34
20
17
27
1.95
35362--35517
31
5.0
31
96
1
278
19
19
23
38
1.93
38688--38755
33
2.1
33
83
2
84
55
4
7
32
1.47
43202--43230
8
3.8
8
90
9
51
37
0
0
62
0.96
43563--43751
7
27.6
7
81
10
187
13
32
43
10
1.79
43597--44016
7
60.9
7
88
9
528
13
28
43
14
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44110--44148
20
1.9
20
94
5
69
0
25
58
15
1.37
44110--44148
7
5.7
7
93
6
71
0
25
58
15
1.37
44146--71496
7
3977.3
7
95
4
49441
14
0
43
42
1.45
58476--58515
10
4.0
10
84
9
55
12
0
57
30
1.36

Tables:   1

The End!