Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003316.1 Hibiscus syriacus cultivar Beakdansim tig00006982_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69388

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12928--13019
23
4.2
23
74
14
61
32
23
18
25
1.97
14375--14463
30
3.0
30
90
3
135
37
5
16
40
1.73
14641--14682
21
2.0
21
95
0
75
23
21
28
26
1.99
14966--15035
34
2.1
32
89
5
104
31
15
31
21
1.95
33885--34011
34
3.7
34
72
10
123
52
17
9
20
1.71
33886--34015
69
1.9
69
95
0
233
53
16
10
20
1.72
44739--44778
21
1.9
21
89
0
62
10
25
40
25
1.86
44759--44821
20
2.9
21
79
9
65
15
25
34
23
1.95
54426--54454
3
9.7
3
100
0
58
65
0
0
34
0.93
59223--59274
16
3.2
16
73
10
52
75
1
19
3
1.06
59232--59276
21
2.0
22
91
8
74
77
0
17
4
0.92
59228--59276
9
4.9
9
77
22
53
77
0
18
4
0.92
61344--61635
54
5.4
54
88
0
413
30
9
19
40
1.84
61369--61635
109
2.5
108
88
2
401
31
10
19
38
1.85
63117--63368
118
2.1
118
86
2
346
38
13
22
25
1.91
63263--63445
79
2.3
79
91
1
287
37
16
20
25
1.93
63145--63519
197
1.9
197
87
1
554
37
15
21
25
1.93
63642--63710
22
3.4
22
69
19
76
39
10
31
18
1.84
63646--63707
19
3.2
19
66
20
56
37
11
30
20
1.88
63633--63734
39
2.6
39
96
0
186
37
10
27
24
1.89
63664--63727
17
3.5
17
71
19
56
43
7
28
20
1.79
63953--64091
42
3.4
42
85
4
185
29
21
20
28
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64031--64115
40
2.1
40
86
0
116
28
25
22
23
1.99

Tables:   1

The End!