Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003323.1 Hibiscus syriacus cultivar Beakdansim tig00007001_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66579

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4691--4751
32
1.9
32
86
6
88
57
1
8
32
1.38
4683--4846
80
2.0
82
86
3
233
50
6
9
33
1.60
10337--10363
12
2.2
12
100
0
54
40
25
0
33
1.56
11663--11703
20
2.0
21
90
4
66
39
0
0
60
0.96
13046--13094
23
2.1
23
100
0
98
40
16
18
24
1.90
13139--13290
67
2.3
67
86
2
207
30
13
16
39
1.87
25092--25201
42
2.6
43
98
1
213
30
22
8
39
1.83
29196--29235
2
20.0
2
100
0
80
50
0
0
50
1.00
32428--32547
60
2.0
60
83
3
152
35
18
15
30
1.91
32765--32897
60
2.2
60
81
7
146
33
17
15
33
1.92
49464--49525
26
2.4
26
94
5
108
30
12
8
48
1.70

Tables:   1

The End!