Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003331.1 Hibiscus syriacus cultivar Beakdansim tig00007012_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52211

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2061--2091
16
1.9
16
100
0
62
45
12
6
35
1.68
14763--14876
38
3.1
38
71
10
101
50
1
7
41
1.40
20612--20678
34
2.0
34
85
8
93
62
14
0
22
1.32
20886--20928
6
7.2
6
89
0
68
2
44
16
37
1.60
21245--21308
27
2.4
27
81
0
83
15
15
50
18
1.79
22957--23008
8
6.1
9
73
13
56
63
1
1
32
1.16
22959--23015
16
3.5
16
88
4
78
63
1
1
33
1.15
23054--23083
10
3.0
10
95
0
51
40
0
33
26
1.57
27245--27276
2
16.5
2
93
6
57
50
0
0
50
1.00
27421--27541
59
2.1
59
98
0
233
47
9
10
32
1.70
27431--27555
59
2.1
59
94
2
216
48
12
9
30
1.72
38331--38370
21
1.9
21
85
10
55
25
37
25
12
1.91
40891--40934
23
2.0
23
81
4
54
50
11
2
36
1.51
42983--43012
2
15.0
2
100
0
60
50
0
0
50
1.00
49877--49930
28
1.9
28
85
7
74
20
11
22
46
1.82
50009--50066
21
2.6
22
75
8
64
65
3
1
29
1.19
50795--50863
23
3.1
22
76
15
63
30
0
2
66
1.06
51254--51603
178
2.0
180
82
10
441
40
5
9
44
1.60

Tables:   1

The End!