Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003336.1 Hibiscus syriacus cultivar Beakdansim tig00007022_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68100

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
910--971
30
2.1
30
84
3
81
38
4
17
38
1.71
14215--14270
24
2.3
25
87
3
78
19
1
7
71
1.18
14220--14270
25
2.1
24
88
3
75
19
1
7
70
1.21
25040--25080
22
1.9
21
85
14
57
58
14
9
17
1.62
26114--26322
75
2.8
75
84
4
242
23
32
23
21
1.98
27312--27356
13
3.3
13
78
9
54
62
2
2
33
1.20
27312--27363
27
2.0
28
85
11
74
61
5
1
30
1.30
27370--27463
32
3.0
30
75
14
86
59
1
7
31
1.32
27671--27726
2
28.0
2
100
0
112
50
0
0
50
1.00
28723--28828
3
35.7
3
86
5
153
67
0
1
30
1.01
32781--32842
2
31.0
2
100
0
124
50
0
0
50
1.00
37951--38031
42
2.0
42
87
2
119
33
24
17
24
1.96
38061--39151
215
5.1
212
91
1
1669
32
18
15
33
1.93
39137--39265
36
3.5
37
84
8
149
23
18
21
36
1.95
44623--44676
14
3.6
14
77
18
63
59
9
14
16
1.60
44623--44690
14
4.7
14
75
16
59
55
8
16
19
1.66
44622--44694
32
2.3
32
95
0
128
57
9
15
17
1.64
49223--49294
32
2.3
32
92
2
119
58
8
15
18
1.61
49237--49278
18
2.2
18
87
8
57
54
9
16
19
1.69
54778--54815
17
2.2
18
85
4
51
13
2
7
76
1.11
56640--56696
22
2.6
22
97
0
105
24
10
10
54
1.66
62174--62214
18
2.3
18
91
0
64
21
48
7
21
1.74

Tables:   1

The End!