Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000334.1 Hibiscus syriacus cultivar Beakdansim tig00000619_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62642

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3271--3297
2
13.5
2
100
0
54
51
0
0
48
1.00
8782--8878
47
2.1
47
94
0
167
46
6
19
27
1.74
9184--9258
2
38.0
2
94
2
134
48
0
0
52
1.00
12214--12258
14
3.2
14
80
0
63
11
11
15
62
1.55
12363--12465
33
3.1
33
81
1
107
9
14
17
58
1.63
19546--19581
2
18.0
2
100
0
72
0
50
0
50
1.00
21484--21540
2
28.5
2
96
0
105
49
1
0
49
1.11
28478--28511
16
2.2
16
89
5
52
47
2
5
44
1.42
28477--28572
45
2.2
45
83
5
115
46
3
6
43
1.44
31534--31901
19
19.0
19
71
11
187
22
21
21
34
1.97
31534--31904
40
9.6
40
79
8
381
22
21
21
34
1.97
31564--31631
35
1.9
35
87
0
100
25
22
16
36
1.94
31639--31742
53
2.0
53
96
3
192
24
23
20
32
1.98
32341--32378
19
2.0
19
89
0
58
34
26
5
34
1.79
44896--44956
6
10.2
6
94
0
104
34
29
0
36
1.58

Tables:   1

The End!