Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003348.1 Hibiscus syriacus cultivar Beakdansim tig00007048_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52239

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8004--8045
22
1.9
22
85
9
59
21
7
19
52
1.69
16792--16868
37
2.1
37
85
4
102
48
1
3
46
1.28
24296--24323
2
14.0
2
100
0
56
50
0
0
50
1.00
26295--26377
34
2.4
34
80
15
91
42
0
0
57
0.98
26321--26386
16
3.9
16
76
11
53
42
0
0
57
0.98
41765--41829
30
2.2
30
88
5
96
35
26
29
9
1.87
42038--42108
24
2.9
24
91
2
97
39
14
18
28
1.89
42053--42108
24
2.3
24
100
0
112
37
16
17
28
1.91
46122--46222
32
3.2
32
86
8
118
47
3
18
29
1.67
51037--51062
13
2.0
13
100
0
52
53
0
0
46
1.00

Tables:   1

The End!