Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000335.1 Hibiscus syriacus cultivar Beakdansim tig00000624_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66499

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4250--4299
23
2.1
24
82
10
59
32
12
2
54
1.49
4743--4801
30
2.0
30
83
6
75
37
18
8
35
1.81
4743--4811
30
2.3
29
78
14
68
39
17
8
34
1.80
7099--7140
18
2.3
18
95
0
75
28
11
33
26
1.92
10556--10625
12
5.8
12
73
6
52
15
14
20
50
1.78
10519--10623
48
2.2
48
81
6
115
18
17
17
47
1.83
10556--10627
24
3.0
24
83
0
99
16
13
19
50
1.79
12383--12530
75
2.0
74
93
1
251
29
16
32
22
1.95
25871--25915
2
22.5
2
100
0
90
48
0
0
51
1.00
34638--34676
20
2.0
20
85
10
53
38
12
7
41
1.72
35182--35210
14
2.0
15
93
6
51
13
13
13
58
1.63
37228--37287
29
2.2
27
85
11
86
43
10
5
41
1.60
39966--40041
14
5.8
13
69
17
50
57
11
13
17
1.64
39989--40049
24
2.5
24
78
5
70
57
13
13
16
1.66
47830--47901
36
2.0
36
100
0
144
27
8
19
44
1.79
48032--48074
23
2.0
21
86
9
59
51
0
2
46
1.13
49470--49527
28
2.1
28
100
0
116
50
13
10
25
1.74
57635--57710
31
2.4
32
82
4
91
22
11
27
38
1.89
57705--57773
27
2.4
29
83
9
97
17
11
26
44
1.82

Tables:   1

The End!