Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003356.1 Hibiscus syriacus cultivar Beakdansim tig00007062_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51067

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4101--4129
13
2.2
13
100
0
58
34
6
0
58
1.25
10682--10713
16
2.1
16
94
5
57
40
6
25
28
1.79
11569--11609
16
2.5
16
88
4
55
68
0
4
26
1.10
11811--11857
22
2.1
22
84
7
60
61
4
17
17
1.49
11833--11870
19
2.0
19
89
0
58
52
2
23
21
1.59
12118--12175
30
2.0
29
86
3
80
72
0
6
20
1.07
29321--29362
22
1.9
22
85
9
59
21
7
19
52
1.69
38445--38783
36
8.9
37
77
14
316
42
2
7
47
1.45
38445--38757
75
4.1
74
86
10
425
42
2
7
47
1.44
38631--38726
47
2.1
45
94
3
165
42
1
6
50
1.34
38556--38773
118
1.8
120
86
4
316
42
2
7
47
1.47
38783--38835
4
13.0
4
88
4
79
24
5
0
69
1.09
40277--40310
4
8.2
4
87
6
50
26
2
0
70
1.01
40251--40309
21
2.9
21
77
10
68
25
6
1
66
1.26
40416--40477
29
2.1
31
84
6
83
11
9
3
75
1.14

Tables:   1

The End!