Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003359.1 Hibiscus syriacus cultivar Beakdansim tig00007068_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75259

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4008--4116
40
2.7
40
95
0
191
22
12
27
36
1.91
8263--8313
21
2.4
21
83
6
68
15
1
3
78
0.99
8258--8311
20
2.7
20
86
13
76
16
1
3
77
1.00
11772--11818
11
4.4
11
75
5
51
82
2
12
2
0.84
11773--11821
21
2.3
22
82
10
66
81
2
14
2
0.87
11772--11828
19
3.1
18
79
5
62
80
3
14
1
0.92
12892--12927
18
2.0
18
94
0
63
16
8
33
41
1.78
13414--13489
36
2.1
37
92
2
127
26
23
13
36
1.91
13467--13524
32
1.9
31
83
13
77
39
18
8
32
1.82
14351--14881
106
5.0
106
90
1
760
35
23
18
21
1.95
21822--21950
34
3.8
34
88
4
170
23
20
14
41
1.89
21799--21940
34
4.1
34
87
3
117
22
21
14
41
1.89
21797--21950
69
2.2
68
82
3
193
21
20
16
41
1.90
27986--28013
5
5.6
5
100
0
56
42
0
0
57
0.99
32275--32372
35
2.7
36
84
6
144
37
6
11
44
1.65
32277--32392
37
3.2
36
80
9
139
38
5
12
43
1.66
36427--36488
27
2.3
27
97
0
115
32
19
22
25
1.97
39442--39509
29
2.3
29
89
0
100
27
22
22
27
1.99
40671--40761
2
49.0
2
66
14
52
51
0
0
48
1.00
51681--51720
12
3.2
12
93
6
71
15
55
15
15
1.71
51680--51720
13
3.2
13
93
6
75
14
56
14
14
1.69
54980--55011
15
2.1
16
94
5
57
6
25
18
50
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55760--55791
16
2.0
16
93
0
55
34
25
6
34
1.81
56197--56236
12
3.2
12
93
6
71
15
55
15
15
1.71
56196--56236
13
3.2
13
93
6
75
14
56
14
14
1.69
57755--57804
26
1.9
26
95
0
91
36
8
16
40
1.77
57765--57808
13
3.4
13
74
0
52
34
9
18
38
1.82
58454--58480
6
4.5
6
100
0
54
51
14
33
0
1.43
64982--65014
14
2.4
14
100
0
66
57
12
0
30
1.35
65165--65236
37
2.0
36
83
5
92
43
1
4
51
1.29
71913--72028
29
3.9
29
76
10
94
31
22
17
28
1.96
73058--73102
21
2.1
21
87
0
63
15
24
28
31
1.96

Tables:   1

The End!