Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003362.1 Hibiscus syriacus cultivar Beakdansim tig00007073_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66716

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5354--5397
19
2.3
19
100
0
88
40
20
18
20
1.91
12626--12650
2
12.5
2
100
0
50
52
48
0
0
1.00
15365--15409
22
2.0
22
95
0
81
28
8
31
31
1.88
17108--17143
18
1.9
19
88
5
56
44
8
11
36
1.70
17588--17617
2
15.0
2
100
0
60
50
0
0
50
1.00
18192--19087
199
4.5
200
78
6
801
35
10
20
33
1.87
21848--21891
21
2.1
21
100
0
88
56
20
13
9
1.64
22354--22396
15
2.9
15
85
0
59
62
9
0
27
1.25
24206--24261
26
2.1
27
86
3
78
46
3
5
44
1.43
25017--25122
34
3.1
33
85
5
140
16
16
18
49
1.80
26738--26766
14
2.1
14
100
0
58
51
6
13
27
1.66
28840--29224
199
1.9
199
94
1
673
34
21
21
22
1.97
31498--31599
31
3.3
31
79
2
114
25
15
6
51
1.68
31513--31597
32
2.7
31
85
1
107
21
16
8
54
1.68
32009--32034
3
8.7
3
100
0
52
65
0
0
34
0.93
33267--33330
31
2.2
29
80
8
76
32
25
9
32
1.88
34213--34289
37
2.1
37
83
9
95
46
2
3
46
1.34
34937--34962
11
2.4
11
100
0
52
46
0
15
38
1.46
39063--39097
13
2.8
12
83
8
52
71
2
0
25
1.00
44571--44626
23
2.5
23
76
2
60
66
1
1
30
1.12
50211--50245
14
2.4
15
85
9
54
14
14
22
48
1.79
53343--53383
17
2.3
18
84
12
50
46
0
0
53
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56096--56154
22
2.7
22
74
10
66
32
13
13
40
1.84
62887--62938
23
2.3
23
96
0
95
26
23
13
36
1.92

Tables:   1

The End!